Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM50Q86XT4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 AC016734.2-201ENST00000624325 1377 ntBASIC20.78■□□□□ 0.92
TRIM50Q86XT4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM50Q86XT4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 RNF126P1-202ENST00000569893 925 ntBASIC20.77■□□□□ 0.92
TRIM50Q86XT4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 AL161938.1-201ENST00000569833 2180 ntBASIC20.77■□□□□ 0.92
TRIM50Q86XT4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 AC034236.2-201ENST00000606662 1610 ntBASIC20.77■□□□□ 0.92
TRIM50Q86XT4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM50Q86XT4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM50Q86XT4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.77■□□□□ 0.91
TRIM50Q86XT4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM50Q86XT4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM50Q86XT4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM50Q86XT4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM50Q86XT4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 AP002383.4-201ENST00000442518 975 ntBASIC20.76■□□□□ 0.91
TRIM50Q86XT4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 TSSC2-201ENST00000450217 709 ntBASIC20.76■□□□□ 0.91
TRIM50Q86XT4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 KRT8P7-201ENST00000533003 1432 ntBASIC20.76■□□□□ 0.91
TRIM50Q86XT4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM50Q86XT4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 MIR662-201ENST00000384847 95 ntBASIC20.75■□□□□ 0.91
TRIM50Q86XT4 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM50Q86XT4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms