Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CSMD2Q7Z408 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 AL591684.3-201ENST00000605187 298 ntBASIC15.69■□□□□ 0.1
CSMD2Q7Z408 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 VENTXP7-201ENST00000475503 772 ntBASIC15.69■□□□□ 0.1
CSMD2Q7Z408 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSMD2Q7Z408 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 AC040169.1-201ENST00000565382 521 ntBASIC15.68■□□□□ 0.1
CSMD2Q7Z408 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 AC114341.1-201ENST00000618070 349 ntBASIC15.68■□□□□ 0.1
CSMD2Q7Z408 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.68■□□□□ 0.1
CSMD2Q7Z408 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 HOXB1-202ENST00000577092 1414 ntBASIC15.68■□□□□ 0.1
CSMD2Q7Z408 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 POM121L3P-201ENST00000419331 1163 ntBASIC15.68■□□□□ 0.1
CSMD2Q7Z408 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 COX20P2-201ENST00000452636 358 ntBASIC15.68■□□□□ 0.1
CSMD2Q7Z408 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSMD2Q7Z408 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 RPS2P1-201ENST00000434010 821 ntBASIC15.67■□□□□ 0.1
CSMD2Q7Z408 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSMD2Q7Z408 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.66■□□□□ 0.1
CSMD2Q7Z408 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 CNN2P11-201ENST00000429351 262 ntBASIC15.66■□□□□ 0.1
CSMD2Q7Z408 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.66■□□□□ 0.1
CSMD2Q7Z408 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms