Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SHFQ7M4L6 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 NBPF21P-201ENST00000425093 1451 ntBASIC16.87■□□□□ 0.29
SHFQ7M4L6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 AL160286.2-201ENST00000567150 934 ntBASIC16.87■□□□□ 0.29
SHFQ7M4L6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.87■□□□□ 0.29
SHFQ7M4L6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SHFQ7M4L6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 AC008764.6-201ENST00000595909 2069 ntBASIC16.86■□□□□ 0.29
SHFQ7M4L6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.86■□□□□ 0.29
SHFQ7M4L6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHFQ7M4L6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 C1QL1P1-201ENST00000568105 661 ntBASIC16.85■□□□□ 0.29
SHFQ7M4L6 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 AC092666.2-201ENST00000613287 246 ntBASIC16.85■□□□□ 0.29
SHFQ7M4L6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.85■□□□□ 0.29
SHFQ7M4L6 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.85■□□□□ 0.29
SHFQ7M4L6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHFQ7M4L6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms