Protein–RNA interactions for Protein: Q6ZTW0

TPGS1, Tubulin polyglutamylase complex subunit 1, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1Q6ZTW0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 AC104390.1-201ENST00000555663 520 ntBASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 AC010240.3-201ENST00000607688 395 ntBASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 KRT8P7-201ENST00000533003 1432 ntBASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 HOXB1-202ENST00000577092 1414 ntBASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TPGS1Q6ZTW0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 AL136038.4-201ENST00000603606 1261 ntBASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.15■□□□□ 0.66
TPGS1Q6ZTW0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 AL391807.1-203ENST00000604392 2365 ntBASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.14■□□□□ 0.66
TPGS1Q6ZTW0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 HCG4P8-203ENST00000443049 980 ntBASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 AL357033.4-201ENST00000617703 1807 ntBASIC19.14■□□□□ 0.65
TPGS1Q6ZTW0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 HEIH-201ENST00000623091 1652 ntBASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TPGS1Q6ZTW0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TPGS1Q6ZTW0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPGS1Q6ZTW0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPGS1Q6ZTW0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TPGS1Q6ZTW0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms