Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 LINC01311-201ENST00000565162 1445 ntBASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 HYMAI.1-201ENST00000620949 238 ntBASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDPD4Q6W3E5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 KRT18P41-201ENST00000518924 1277 ntBASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 AL121956.5-201ENST00000625261 221 ntBASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDPD4Q6W3E5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 KRT8P50-201ENST00000562022 1438 ntBASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 AC092597.1-201ENST00000487352 616 ntBASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 MIR3180-4-201ENST00000582223 153 ntBASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDPD4Q6W3E5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 AP000593.1-201ENST00000393668 712 ntBASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 ZNF444P1-201ENST00000559497 298 ntBASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 AC083849.1-201ENST00000615227 514 ntBASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GDPD4Q6W3E5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms