Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
BRAT1Q6PJG6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAT1Q6PJG6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.67■□□□□ 0.58
BRAT1Q6PJG6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAT1Q6PJG6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAT1Q6PJG6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BRAT1Q6PJG6 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 SPDYE15P-201ENST00000424157 909 ntBASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 KRT18P38-201ENST00000449496 1282 ntBASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 AC009065.1-201ENST00000564055 1225 ntBASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BRAT1Q6PJG6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 AL671277.2-201ENST00000458060 996 ntBASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
BRAT1Q6PJG6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
BRAT1Q6PJG6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
BRAT1Q6PJG6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 AL031133.1-201ENST00000406807 723 ntBASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 AC112907.2-201ENST00000448639 330 ntBASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 KRT8P50-201ENST00000562022 1438 ntBASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 AC093525.10-201ENST00000625130 1569 ntBASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRAT1Q6PJG6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 AL157888.1-201ENST00000631930 593 ntBASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 AC112777.1-201ENST00000540175 1423 ntBASIC18.63■□□□□ 0.57
BRAT1Q6PJG6 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms