Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 AC092597.1-201ENST00000487352 616 ntBASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
H3F3CQ6NXT2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 KRT18P23-201ENST00000435622 1283 ntBASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
H3F3CQ6NXT2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 HLA-F-220ENST00000434407 884 ntBASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 AC034236.2-201ENST00000606662 1610 ntBASIC17.21■□□□□ 0.35
H3F3CQ6NXT2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.21■□□□□ 0.34
H3F3CQ6NXT2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3F3CQ6NXT2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.2■□□□□ 0.34
H3F3CQ6NXT2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3F3CQ6NXT2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
H3F3CQ6NXT2 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3F3CQ6NXT2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
H3F3CQ6NXT2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.2■□□□□ 0.34
H3F3CQ6NXT2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms