Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SNAPC4Q5SXM2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNAPC4Q5SXM2 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
SNAPC4Q5SXM2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC30.39■■■□□ 2.45
SNAPC4Q5SXM2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC30.39■■■□□ 2.45
SNAPC4Q5SXM2 HLA-J-201ENST00000462773 1622 ntBASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 LBH-203ENST00000404397 543 ntTSL 4 BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 COA5-202ENST00000409997 557 ntTSL 4 BASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 METTL21AP1-201ENST00000438852 635 ntBASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 CYMP-203ENST00000474680 1263 ntBASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 AC083906.6-201ENST00000641366 219 ntBASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 AC079781.4-201ENST00000641908 219 ntBASIC30.38■■■□□ 2.45
SNAPC4Q5SXM2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 INTS4P1-201ENST00000438455 1935 ntBASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 MIR3687-2-201ENST00000577708 61 ntBASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 MIR3687-1-201ENST00000614492 61 ntBASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
SNAPC4Q5SXM2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 AC007967.2-201ENST00000432613 625 ntBASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 OR7E14P-202ENST00000530490 1290 ntBASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 RFPL4AP1-201ENST00000530883 850 ntBASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 AC008735.5-201ENST00000623544 497 ntBASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SNAPC4Q5SXM2 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC30.35■■■□□ 2.45
SNAPC4Q5SXM2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms