Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.73■□□□□ 0.75
VARS2Q5ST30 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VARS2Q5ST30 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 AP002383.4-201ENST00000442518 975 ntBASIC19.72■□□□□ 0.75
VARS2Q5ST30 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 AC092329.2-201ENST00000598402 547 ntBASIC19.72■□□□□ 0.75
VARS2Q5ST30 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VARS2Q5ST30 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.72■□□□□ 0.75
VARS2Q5ST30 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VARS2Q5ST30 RNF165-205ENST00000588679 2904 ntBASIC19.71■□□□□ 0.75
VARS2Q5ST30 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.71■□□□□ 0.75
VARS2Q5ST30 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.71■□□□□ 0.75
VARS2Q5ST30 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARS2Q5ST30 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARS2Q5ST30 TSPY22P-201ENST00000427496 604 ntBASIC19.71■□□□□ 0.75
VARS2Q5ST30 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.71■□□□□ 0.75
VARS2Q5ST30 MIR3180-1-201ENST00000580374 94 ntBASIC19.71■□□□□ 0.75
VARS2Q5ST30 MIR3180-3-201ENST00000584616 94 ntBASIC19.71■□□□□ 0.75
VARS2Q5ST30 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARS2Q5ST30 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.71■□□□□ 0.75
VARS2Q5ST30 AC012313.10-201ENST00000623509 926 ntBASIC19.71■□□□□ 0.75
VARS2Q5ST30 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARS2Q5ST30 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VARS2Q5ST30 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VARS2Q5ST30 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VARS2Q5ST30 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VARS2Q5ST30 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 KRT8P50-201ENST00000562022 1438 ntBASIC19.7■□□□□ 0.74
VARS2Q5ST30 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.7■□□□□ 0.74
VARS2Q5ST30 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VARS2Q5ST30 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 CHCHD2P8-201ENST00000429873 447 ntBASIC19.69■□□□□ 0.74
VARS2Q5ST30 AP002414.4-201ENST00000589764 1148 ntBASIC19.69■□□□□ 0.74
VARS2Q5ST30 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
VARS2Q5ST30 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VARS2Q5ST30 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms