Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 AC034236.2-201ENST00000606662 1610 ntBASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 AC141257.4-201ENST00000634557 245 ntBASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 AC136944.6-201ENST00000634818 245 ntBASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 AC009113.1-201ENST00000570267 2443 ntBASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCSMST1Q4G0I0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCSMST1Q4G0I0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSMST1Q4G0I0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSMST1Q4G0I0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSMST1Q4G0I0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCSMST1Q4G0I0 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.08■□□□□ 0.49
CCSMST1Q4G0I0 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCSMST1Q4G0I0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 KRT18P23-201ENST00000435622 1283 ntBASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.08■□□□□ 0.48
CCSMST1Q4G0I0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 KRT8P50-201ENST00000562022 1438 ntBASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 RCN1P1-201ENST00000400413 996 ntBASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 LIN28AP1-201ENST00000429574 405 ntBASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CCSMST1Q4G0I0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms