Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SHROOM1Q2M3G4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 DRAXINP1-201ENST00000437611 948 ntBASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 AC091607.1-201ENST00000490318 1060 ntBASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 AC116562.4-201ENST00000641316 2276 ntBASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.74■■□□□ 1.07
SHROOM1Q2M3G4 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SHROOM1Q2M3G4 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 IFNL4P1-201ENST00000607083 540 ntBASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SHROOM1Q2M3G4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 EMBP1-201ENST00000458200 901 ntBASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 FOSL1P1-201ENST00000511041 816 ntBASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 AC005332.7-201ENST00000614046 2005 ntBASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SHROOM1Q2M3G4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
SHROOM1Q2M3G4 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.7■■□□□ 1.06
SHROOM1Q2M3G4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms