Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.43■□□□□ 0.22
NKX6-1P78426 AL359075.1-203ENST00000462729 1002 ntBASIC16.43■□□□□ 0.22
NKX6-1P78426 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.43■□□□□ 0.22
NKX6-1P78426 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.43■□□□□ 0.22
NKX6-1P78426 AL023803.3-201ENST00000615559 522 ntBASIC16.43■□□□□ 0.22
NKX6-1P78426 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.43■□□□□ 0.22
NKX6-1P78426 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
NKX6-1P78426 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.43■□□□□ 0.22
NKX6-1P78426 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
NKX6-1P78426 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.43■□□□□ 0.22
NKX6-1P78426 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
NKX6-1P78426 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.43■□□□□ 0.22
NKX6-1P78426 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 AC092338.2-201ENST00000568827 1415 ntBASIC16.43■□□□□ 0.22
NKX6-1P78426 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NKX6-1P78426 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.42■□□□□ 0.22
NKX6-1P78426 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NKX6-1P78426 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.42■□□□□ 0.22
NKX6-1P78426 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.42■□□□□ 0.22
NKX6-1P78426 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.42■□□□□ 0.22
NKX6-1P78426 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.42■□□□□ 0.22
NKX6-1P78426 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.42■□□□□ 0.22
NKX6-1P78426 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.42■□□□□ 0.22
NKX6-1P78426 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.42■□□□□ 0.22
NKX6-1P78426 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
NKX6-1P78426 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.42■□□□□ 0.22
NKX6-1P78426 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.42■□□□□ 0.22
NKX6-1P78426 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
NKX6-1P78426 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.41■□□□□ 0.22
NKX6-1P78426 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NKX6-1P78426 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
NKX6-1P78426 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.41■□□□□ 0.22
NKX6-1P78426 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.41■□□□□ 0.22
NKX6-1P78426 AL691432.3-201ENST00000621860 400 ntBASIC16.41■□□□□ 0.22
NKX6-1P78426 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.41■□□□□ 0.22
NKX6-1P78426 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.41■□□□□ 0.22
NKX6-1P78426 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NKX6-1P78426 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NKX6-1P78426 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.41■□□□□ 0.22
NKX6-1P78426 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.41■□□□□ 0.22
NKX6-1P78426 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.41■□□□□ 0.22
NKX6-1P78426 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NKX6-1P78426 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NKX6-1P78426 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
NKX6-1P78426 AC098818.2-201ENST00000564925 2320 ntBASIC16.4■□□□□ 0.22
NKX6-1P78426 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
NKX6-1P78426 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.4■□□□□ 0.22
NKX6-1P78426 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NKX6-1P78426 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
NKX6-1P78426 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms