Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.66■■□□□ 1.06
IRX3P78415 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
IRX3P78415 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
IRX3P78415 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.66■■□□□ 1.06
IRX3P78415 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
IRX3P78415 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 KRT8P10-201ENST00000450021 1447 ntBASIC21.65■■□□□ 1.06
IRX3P78415 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC21.65■■□□□ 1.06
IRX3P78415 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 DRAXINP1-201ENST00000437611 948 ntBASIC21.65■■□□□ 1.06
IRX3P78415 KRT17P6-201ENST00000453795 1220 ntBASIC21.65■■□□□ 1.06
IRX3P78415 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.65■■□□□ 1.06
IRX3P78415 TPSP2-201ENST00000561760 610 ntBASIC21.65■■□□□ 1.06
IRX3P78415 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.65■■□□□ 1.06
IRX3P78415 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.65■■□□□ 1.06
IRX3P78415 AC010240.3-201ENST00000607688 395 ntBASIC21.65■■□□□ 1.06
IRX3P78415 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
IRX3P78415 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 AC008556.1-201ENST00000610908 2040 ntBASIC21.65■■□□□ 1.06
IRX3P78415 AL512353.2-201ENST00000448759 1962 ntBASIC21.65■■□□□ 1.06
IRX3P78415 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
IRX3P78415 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IRX3P78415 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.64■■□□□ 1.06
IRX3P78415 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.64■■□□□ 1.06
IRX3P78415 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
IRX3P78415 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.64■■□□□ 1.06
IRX3P78415 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
IRX3P78415 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IRX3P78415 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IRX3P78415 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.64■■□□□ 1.05
IRX3P78415 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.64■■□□□ 1.05
IRX3P78415 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21.64■■□□□ 1.05
IRX3P78415 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.64■■□□□ 1.05
IRX3P78415 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.64■■□□□ 1.05
IRX3P78415 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IRX3P78415 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
IRX3P78415 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.64■■□□□ 1.05
IRX3P78415 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IRX3P78415 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
IRX3P78415 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.64■■□□□ 1.05
IRX3P78415 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.64■■□□□ 1.05
IRX3P78415 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
IRX3P78415 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
IRX3P78415 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
IRX3P78415 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.63■■□□□ 1.05
IRX3P78415 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
IRX3P78415 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
IRX3P78415 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.63■■□□□ 1.05
IRX3P78415 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
IRX3P78415 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
IRX3P78415 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.63■■□□□ 1.05
IRX3P78415 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.63■■□□□ 1.05
IRX3P78415 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.63■■□□□ 1.05
IRX3P78415 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.63■■□□□ 1.05
IRX3P78415 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 AC104390.1-201ENST00000555663 520 ntBASIC21.63■■□□□ 1.05
IRX3P78415 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.63■■□□□ 1.05
IRX3P78415 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.63■■□□□ 1.05
IRX3P78415 AL732292.2-201ENST00000609649 430 ntBASIC21.63■■□□□ 1.05
IRX3P78415 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
IRX3P78415 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.63■■□□□ 1.05
IRX3P78415 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
IRX3P78415 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
IRX3P78415 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.62■■□□□ 1.05
IRX3P78415 Z83836.1-201ENST00000624605 1642 ntBASIC21.62■■□□□ 1.05
IRX3P78415 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
IRX3P78415 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
IRX3P78415 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.62■■□□□ 1.05
IRX3P78415 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.62■■□□□ 1.05
IRX3P78415 TOB2P1-201ENST00000469761 992 ntBASIC21.62■■□□□ 1.05
IRX3P78415 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.62■■□□□ 1.05
IRX3P78415 AL121772.3-201ENST00000610840 674 ntBASIC21.62■■□□□ 1.05
IRX3P78415 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms