Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
CCNA1P78396 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNA1P78396 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNA1P78396 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.19■□□□□ 0.98
CCNA1P78396 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNA1P78396 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNA1P78396 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNA1P78396 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
CCNA1P78396 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.18■□□□□ 0.98
CCNA1P78396 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.18■□□□□ 0.98
CCNA1P78396 SAPCD2P3-201ENST00000455031 850 ntBASIC21.18■□□□□ 0.98
CCNA1P78396 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.18■□□□□ 0.98
CCNA1P78396 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNA1P78396 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNA1P78396 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCNA1P78396 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNA1P78396 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCNA1P78396 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 MINOS1P3-201ENST00000457048 203 ntBASIC21.17■□□□□ 0.98
CCNA1P78396 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNA1P78396 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNA1P78396 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNA1P78396 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CCNA1P78396 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNA1P78396 AC064862.7-201ENST00000604520 867 ntBASIC21.17■□□□□ 0.98
CCNA1P78396 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCNA1P78396 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNA1P78396 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 AC141586.3-201ENST00000562166 1838 ntBASIC21.17■□□□□ 0.98
CCNA1P78396 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCNA1P78396 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCNA1P78396 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNA1P78396 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCNA1P78396 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNA1P78396 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCNA1P78396 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CCNA1P78396 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.16■□□□□ 0.98
CCNA1P78396 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCNA1P78396 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCNA1P78396 NUS1P2-201ENST00000417358 873 ntBASIC21.16■□□□□ 0.98
CCNA1P78396 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CCNA1P78396 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC21.16■□□□□ 0.98
CCNA1P78396 GPALPP1-207ENST00000611650 899 ntBASIC21.16■□□□□ 0.98
CCNA1P78396 AC023511.2-201ENST00000618803 211 ntBASIC21.16■□□□□ 0.98
CCNA1P78396 REXO1L6P-202ENST00000619970 1078 ntBASIC21.16■□□□□ 0.98
CCNA1P78396 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNA1P78396 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNA1P78396 LINC01521-201ENST00000504184 1943 ntBASIC21.16■□□□□ 0.98
CCNA1P78396 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 Z98044.1-201ENST00000632503 1764 ntBASIC21.15■□□□□ 0.98
CCNA1P78396 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CCNA1P78396 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNA1P78396 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
CCNA1P78396 MRPL3P1-201ENST00000400109 1033 ntBASIC21.15■□□□□ 0.98
CCNA1P78396 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNA1P78396 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC21.15■□□□□ 0.98
CCNA1P78396 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.15■□□□□ 0.98
CCNA1P78396 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CCNA1P78396 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.15■□□□□ 0.98
CCNA1P78396 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCNA1P78396 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CCNA1P78396 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCNA1P78396 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms