Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.91■□□□□ 0.94
TPM4P67936 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TPM4P67936 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.91■□□□□ 0.94
TPM4P67936 AC097658.1-201ENST00000475555 843 ntBASIC20.91■□□□□ 0.94
TPM4P67936 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.91■□□□□ 0.94
TPM4P67936 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TPM4P67936 MIR5787-201ENST00000611784 55 ntBASIC20.91■□□□□ 0.94
TPM4P67936 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.91■□□□□ 0.94
TPM4P67936 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TPM4P67936 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM4P67936 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 CROCCP1-201ENST00000426910 5675 ntBASIC20.9■□□□□ 0.94
TPM4P67936 SLC29A4P1-201ENST00000398760 971 ntBASIC20.9■□□□□ 0.94
TPM4P67936 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM4P67936 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.9■□□□□ 0.94
TPM4P67936 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 AL121832.2-201ENST00000610979 668 ntBASIC20.9■□□□□ 0.94
TPM4P67936 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM4P67936 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TPM4P67936 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.9■□□□□ 0.94
TPM4P67936 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TPM4P67936 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TPM4P67936 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM4P67936 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM4P67936 OR6D1P-203ENST00000641209 4860 ntBASIC20.89■□□□□ 0.94
TPM4P67936 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
TPM4P67936 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TPM4P67936 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TPM4P67936 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TPM4P67936 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM4P67936 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TPM4P67936 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.89■□□□□ 0.94
TPM4P67936 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.89■□□□□ 0.94
TPM4P67936 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM4P67936 AC008764.6-201ENST00000595909 2069 ntBASIC20.89■□□□□ 0.93
TPM4P67936 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TPM4P67936 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM4P67936 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.89■□□□□ 0.93
TPM4P67936 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM4P67936 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
TPM4P67936 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM4P67936 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM4P67936 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM4P67936 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM4P67936 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM4P67936 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM4P67936 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
TPM4P67936 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TPM4P67936 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.89■□□□□ 0.93
TPM4P67936 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TPM4P67936 RCC2P6-201ENST00000526625 1557 ntBASIC20.89■□□□□ 0.93
TPM4P67936 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM4P67936 CDCA4P2-201ENST00000441182 718 ntBASIC20.88■□□□□ 0.93
TPM4P67936 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM4P67936 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM4P67936 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.88■□□□□ 0.93
TPM4P67936 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM4P67936 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM4P67936 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.88■□□□□ 0.93
TPM4P67936 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TPM4P67936 MIR4758-201ENST00000577688 71 ntBASIC20.88■□□□□ 0.93
TPM4P67936 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TPM4P67936 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.88■□□□□ 0.93
TPM4P67936 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.88■□□□□ 0.93
TPM4P67936 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 AC067852.2-201ENST00000590513 2313 ntBASIC20.88■□□□□ 0.93
TPM4P67936 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TPM4P67936 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.88■□□□□ 0.93
TPM4P67936 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TPM4P67936 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms