Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.02■□□□□ 0.96
LBX1P52954 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.02■□□□□ 0.96
LBX1P52954 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.02■□□□□ 0.96
LBX1P52954 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.02■□□□□ 0.96
LBX1P52954 SIGLEC30P-201ENST00000455569 941 ntBASIC21.02■□□□□ 0.96
LBX1P52954 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.02■□□□□ 0.96
LBX1P52954 MSRA-206ENST00000521209 814 ntTSL 3 BASIC21.02■□□□□ 0.96
LBX1P52954 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC21.02■□□□□ 0.96
LBX1P52954 AL031432.2-201ENST00000566714 459 ntBASIC21.02■□□□□ 0.96
LBX1P52954 AL928711.1-201ENST00000570165 459 ntBASIC21.02■□□□□ 0.96
LBX1P52954 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.02■□□□□ 0.96
LBX1P52954 AL359881.2-201ENST00000602973 570 ntBASIC21.02■□□□□ 0.96
LBX1P52954 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.02■□□□□ 0.96
LBX1P52954 AC005593.1-201ENST00000624894 515 ntBASIC21.02■□□□□ 0.96
LBX1P52954 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.02■□□□□ 0.96
LBX1P52954 RCC2P3-201ENST00000418112 1537 ntBASIC21.02■□□□□ 0.96
LBX1P52954 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LBX1P52954 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
LBX1P52954 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LBX1P52954 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.01■□□□□ 0.95
LBX1P52954 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.01■□□□□ 0.95
LBX1P52954 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LBX1P52954 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
LBX1P52954 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LBX1P52954 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.01■□□□□ 0.95
LBX1P52954 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.01■□□□□ 0.95
LBX1P52954 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC21.01■□□□□ 0.95
LBX1P52954 PON3-205ENST00000451904 1053 ntTSL 3 BASIC21.01■□□□□ 0.95
LBX1P52954 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.01■□□□□ 0.95
LBX1P52954 AC087641.1-201ENST00000557561 1021 ntBASIC21.01■□□□□ 0.95
LBX1P52954 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.01■□□□□ 0.95
LBX1P52954 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC21.01■□□□□ 0.95
LBX1P52954 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
LBX1P52954 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.01■□□□□ 0.95
LBX1P52954 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
LBX1P52954 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LBX1P52954 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.01■□□□□ 0.95
LBX1P52954 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21■□□□□ 0.95
LBX1P52954 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21■□□□□ 0.95
LBX1P52954 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21■□□□□ 0.95
LBX1P52954 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC21■□□□□ 0.95
LBX1P52954 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21■□□□□ 0.95
LBX1P52954 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21■□□□□ 0.95
LBX1P52954 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC21■□□□□ 0.95
LBX1P52954 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21■□□□□ 0.95
LBX1P52954 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21■□□□□ 0.95
LBX1P52954 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21■□□□□ 0.95
LBX1P52954 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LBX1P52954 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
LBX1P52954 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
LBX1P52954 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
LBX1P52954 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LBX1P52954 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
LBX1P52954 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LBX1P52954 OR8S1-201ENST00000310194 1080 ntBASIC20.99■□□□□ 0.95
LBX1P52954 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LBX1P52954 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.99■□□□□ 0.95
LBX1P52954 AC011467.2-201ENST00000598425 242 ntBASIC20.99■□□□□ 0.95
LBX1P52954 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.99■□□□□ 0.95
LBX1P52954 AP000867.4-201ENST00000641616 219 ntBASIC20.99■□□□□ 0.95
LBX1P52954 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LBX1P52954 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.99■□□□□ 0.95
LBX1P52954 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.98■□□□□ 0.95
LBX1P52954 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.98■□□□□ 0.95
LBX1P52954 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
LBX1P52954 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LBX1P52954 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LBX1P52954 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.98■□□□□ 0.95
LBX1P52954 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.98■□□□□ 0.95
LBX1P52954 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LBX1P52954 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LBX1P52954 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LBX1P52954 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
LBX1P52954 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms