Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.09■□□□□ 0.49
PDX1P52945 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.09■□□□□ 0.49
PDX1P52945 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDX1P52945 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PDX1P52945 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDX1P52945 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PDX1P52945 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.08■□□□□ 0.49
PDX1P52945 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDX1P52945 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PDX1P52945 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.08■□□□□ 0.49
PDX1P52945 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PDX1P52945 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDX1P52945 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PDX1P52945 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDX1P52945 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PDX1P52945 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.08■□□□□ 0.49
PDX1P52945 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PDX1P52945 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.08■□□□□ 0.49
PDX1P52945 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.08■□□□□ 0.48
PDX1P52945 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.08■□□□□ 0.48
PDX1P52945 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.08■□□□□ 0.48
PDX1P52945 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.08■□□□□ 0.48
PDX1P52945 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.08■□□□□ 0.48
PDX1P52945 MIR3180-1-201ENST00000580374 94 ntBASIC18.08■□□□□ 0.48
PDX1P52945 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.08■□□□□ 0.48
PDX1P52945 MIR3180-3-201ENST00000584616 94 ntBASIC18.08■□□□□ 0.48
PDX1P52945 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.08■□□□□ 0.48
PDX1P52945 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.08■□□□□ 0.48
PDX1P52945 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.08■□□□□ 0.48
PDX1P52945 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PDX1P52945 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
PDX1P52945 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.07■□□□□ 0.48
PDX1P52945 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.07■□□□□ 0.48
PDX1P52945 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PDX1P52945 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 SEC1P-202ENST00000473944 940 ntBASIC18.07■□□□□ 0.48
PDX1P52945 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.07■□□□□ 0.48
PDX1P52945 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.07■□□□□ 0.48
PDX1P52945 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 AC011498.5-201ENST00000592027 486 ntBASIC18.07■□□□□ 0.48
PDX1P52945 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PDX1P52945 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.07■□□□□ 0.48
PDX1P52945 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.07■□□□□ 0.48
PDX1P52945 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PDX1P52945 AC016734.2-201ENST00000624325 1377 ntBASIC18.06■□□□□ 0.48
PDX1P52945 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.06■□□□□ 0.48
PDX1P52945 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.06■□□□□ 0.48
PDX1P52945 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.06■□□□□ 0.48
PDX1P52945 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.06■□□□□ 0.48
PDX1P52945 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PDX1P52945 AP002383.4-201ENST00000442518 975 ntBASIC18.06■□□□□ 0.48
PDX1P52945 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PDX1P52945 TSSC2-201ENST00000450217 709 ntBASIC18.06■□□□□ 0.48
PDX1P52945 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms