Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC3P51654 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC3P51654 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
GPC3P51654 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.59■□□□□ 0.89
GPC3P51654 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
GPC3P51654 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.59■□□□□ 0.89
GPC3P51654 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.59■□□□□ 0.89
GPC3P51654 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC3P51654 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC3P51654 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GPC3P51654 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GPC3P51654 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.58■□□□□ 0.89
GPC3P51654 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.58■□□□□ 0.89
GPC3P51654 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.58■□□□□ 0.89
GPC3P51654 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.58■□□□□ 0.89
GPC3P51654 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.58■□□□□ 0.89
GPC3P51654 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.58■□□□□ 0.89
GPC3P51654 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
GPC3P51654 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.58■□□□□ 0.89
GPC3P51654 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GPC3P51654 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GPC3P51654 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GPC3P51654 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GPC3P51654 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GPC3P51654 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GPC3P51654 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
GPC3P51654 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
GPC3P51654 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
GPC3P51654 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GPC3P51654 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
GPC3P51654 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 MIR564-202ENST00000385049 94 ntBASIC20.57■□□□□ 0.88
GPC3P51654 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
GPC3P51654 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
GPC3P51654 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.57■□□□□ 0.88
GPC3P51654 TNXA-203ENST00000507684 2038 ntBASIC20.57■□□□□ 0.88
GPC3P51654 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.57■□□□□ 0.88
GPC3P51654 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.57■□□□□ 0.88
GPC3P51654 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
GPC3P51654 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
GPC3P51654 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
GPC3P51654 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
GPC3P51654 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.56■□□□□ 0.88
GPC3P51654 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GPC3P51654 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.56■□□□□ 0.88
GPC3P51654 KRT18P23-201ENST00000435622 1283 ntBASIC20.56■□□□□ 0.88
GPC3P51654 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.56■□□□□ 0.88
GPC3P51654 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 MIR3917-201ENST00000580971 93 ntBASIC20.56■□□□□ 0.88
GPC3P51654 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.56■□□□□ 0.88
GPC3P51654 AL157888.1-201ENST00000631930 593 ntBASIC20.56■□□□□ 0.88
GPC3P51654 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.56■□□□□ 0.88
GPC3P51654 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
GPC3P51654 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
GPC3P51654 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
GPC3P51654 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 KRT8P7-201ENST00000533003 1432 ntBASIC20.55■□□□□ 0.88
GPC3P51654 HOXB1-202ENST00000577092 1414 ntBASIC20.55■□□□□ 0.88
GPC3P51654 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
GPC3P51654 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC3P51654 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.55■□□□□ 0.88
GPC3P51654 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC3P51654 AC079602.3-201ENST00000623931 403 ntBASIC20.55■□□□□ 0.88
GPC3P51654 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.55■□□□□ 0.88
GPC3P51654 AC068587.9-201ENST00000641814 219 ntBASIC20.55■□□□□ 0.88
GPC3P51654 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GPC3P51654 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms