Protein–RNA interactions for Protein: P49593

PPM1F, Protein phosphatase 1F, humanhuman

Predicted RBP Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1FP49593 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.35■□□□□ 0.53
PPM1FP49593 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PPM1FP49593 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.35■□□□□ 0.53
PPM1FP49593 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PPM1FP49593 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PPM1FP49593 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.35■□□□□ 0.53
PPM1FP49593 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.35■□□□□ 0.53
PPM1FP49593 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PPM1FP49593 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.34■□□□□ 0.53
PPM1FP49593 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.34■□□□□ 0.53
PPM1FP49593 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.34■□□□□ 0.53
PPM1FP49593 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.34■□□□□ 0.53
PPM1FP49593 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PPM1FP49593 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.34■□□□□ 0.53
PPM1FP49593 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PPM1FP49593 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
PPM1FP49593 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.34■□□□□ 0.53
PPM1FP49593 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PPM1FP49593 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PPM1FP49593 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PPM1FP49593 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PPM1FP49593 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PPM1FP49593 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.33■□□□□ 0.53
PPM1FP49593 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.33■□□□□ 0.53
PPM1FP49593 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PPM1FP49593 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PPM1FP49593 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PPM1FP49593 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.33■□□□□ 0.52
PPM1FP49593 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PPM1FP49593 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.33■□□□□ 0.52
PPM1FP49593 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.33■□□□□ 0.52
PPM1FP49593 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.33■□□□□ 0.52
PPM1FP49593 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.33■□□□□ 0.52
PPM1FP49593 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PPM1FP49593 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PPM1FP49593 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PPM1FP49593 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.33■□□□□ 0.52
PPM1FP49593 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PPM1FP49593 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.33■□□□□ 0.52
PPM1FP49593 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PPM1FP49593 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PPM1FP49593 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.32■□□□□ 0.52
PPM1FP49593 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.32■□□□□ 0.52
PPM1FP49593 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PPM1FP49593 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.32■□□□□ 0.52
PPM1FP49593 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PPM1FP49593 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.32■□□□□ 0.52
PPM1FP49593 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.32■□□□□ 0.52
PPM1FP49593 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.32■□□□□ 0.52
PPM1FP49593 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PPM1FP49593 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.32■□□□□ 0.52
PPM1FP49593 HOMER2P1-201ENST00000455653 964 ntBASIC18.32■□□□□ 0.52
PPM1FP49593 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.32■□□□□ 0.52
PPM1FP49593 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.32■□□□□ 0.52
PPM1FP49593 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.32■□□□□ 0.52
PPM1FP49593 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.32■□□□□ 0.52
PPM1FP49593 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPM1FP49593 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.32■□□□□ 0.52
PPM1FP49593 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
PPM1FP49593 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPM1FP49593 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms