Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 CNN2P6-201ENST00000439038 900 ntBASIC14.74□□□□□ -0.05
CDC34P49427 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 AC009053.2-201ENST00000563701 2365 ntBASIC14.74□□□□□ -0.05
CDC34P49427 AC010980.2-201ENST00000587099 1412 ntBASIC14.74□□□□□ -0.05
CDC34P49427 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC34P49427 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.74□□□□□ -0.05
CDC34P49427 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC34P49427 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC34P49427 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CDC34P49427 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDC34P49427 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDC34P49427 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC34P49427 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC34P49427 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC34P49427 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDC34P49427 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC34P49427 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC34P49427 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC34P49427 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC34P49427 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CDC34P49427 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDC34P49427 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.72□□□□□ -0.05
CDC34P49427 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.72□□□□□ -0.05
CDC34P49427 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 TSPY21P-201ENST00000433481 731 ntBASIC14.72□□□□□ -0.05
CDC34P49427 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDC34P49427 BID-214ENST00000617586 542 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC34P49427 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CDC34P49427 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC34P49427 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
CDC34P49427 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC34P49427 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 PKD1P5-201ENST00000532415 10291 ntBASIC14.71□□□□□ -0.05
CDC34P49427 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CDC34P49427 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms