Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.05■□□□□ 0.96
PRPHP41219 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.05■□□□□ 0.96
PRPHP41219 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.05■□□□□ 0.96
PRPHP41219 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.05■□□□□ 0.96
PRPHP41219 FAM87A-204ENST00000613235 858 ntBASIC21.05■□□□□ 0.96
PRPHP41219 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.05■□□□□ 0.96
PRPHP41219 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.05■□□□□ 0.96
PRPHP41219 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
PRPHP41219 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
PRPHP41219 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PRPHP41219 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PRPHP41219 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PRPHP41219 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PRPHP41219 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
PRPHP41219 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
PRPHP41219 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.04■□□□□ 0.96
PRPHP41219 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PRPHP41219 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
PRPHP41219 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.04■□□□□ 0.96
PRPHP41219 AC009113.1-201ENST00000570267 2443 ntBASIC21.04■□□□□ 0.96
PRPHP41219 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PRPHP41219 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.04■□□□□ 0.96
PRPHP41219 KRT8P7-201ENST00000533003 1432 ntBASIC21.04■□□□□ 0.96
PRPHP41219 AC138932.1-201ENST00000534164 6830 ntBASIC21.04■□□□□ 0.96
PRPHP41219 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PRPHP41219 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
PRPHP41219 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPHP41219 MYLKP1-201ENST00000509077 1580 ntBASIC21.03■□□□□ 0.96
PRPHP41219 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPHP41219 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.03■□□□□ 0.96
PRPHP41219 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 AC087499.1-201ENST00000418141 1075 ntBASIC21.03■□□□□ 0.96
PRPHP41219 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
PRPHP41219 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.03■□□□□ 0.96
PRPHP41219 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPHP41219 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.03■□□□□ 0.96
PRPHP41219 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.03■□□□□ 0.96
PRPHP41219 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
PRPHP41219 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PRPHP41219 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.02■□□□□ 0.96
PRPHP41219 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PRPHP41219 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.02■□□□□ 0.96
PRPHP41219 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.02■□□□□ 0.96
PRPHP41219 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.02■□□□□ 0.96
PRPHP41219 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.02■□□□□ 0.96
PRPHP41219 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
PRPHP41219 KRT8P50-201ENST00000562022 1438 ntBASIC21.02■□□□□ 0.96
PRPHP41219 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PRPHP41219 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PRPHP41219 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PRPHP41219 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.02■□□□□ 0.95
PRPHP41219 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPHP41219 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.01■□□□□ 0.95
PRPHP41219 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRPHP41219 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms