Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
GDNFP39905 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
GDNFP39905 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
GDNFP39905 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.24■□□□□ 0.19
GDNFP39905 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GDNFP39905 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.24■□□□□ 0.19
GDNFP39905 SIRPAP1-201ENST00000448467 1770 ntBASIC16.24■□□□□ 0.19
GDNFP39905 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.24■□□□□ 0.19
GDNFP39905 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.24■□□□□ 0.19
GDNFP39905 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
GDNFP39905 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.24■□□□□ 0.19
GDNFP39905 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.24■□□□□ 0.19
GDNFP39905 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.24■□□□□ 0.19
GDNFP39905 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.24■□□□□ 0.19
GDNFP39905 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
GDNFP39905 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.24■□□□□ 0.19
GDNFP39905 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
GDNFP39905 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
GDNFP39905 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.24■□□□□ 0.19
GDNFP39905 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
GDNFP39905 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.23■□□□□ 0.19
GDNFP39905 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
GDNFP39905 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
GDNFP39905 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
GDNFP39905 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.23■□□□□ 0.19
GDNFP39905 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
GDNFP39905 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.23■□□□□ 0.19
GDNFP39905 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.23■□□□□ 0.19
GDNFP39905 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.23■□□□□ 0.19
GDNFP39905 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.23■□□□□ 0.19
GDNFP39905 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.23■□□□□ 0.19
GDNFP39905 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.23■□□□□ 0.19
GDNFP39905 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
GDNFP39905 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
GDNFP39905 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
GDNFP39905 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
GDNFP39905 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
GDNFP39905 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
GDNFP39905 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.22■□□□□ 0.19
GDNFP39905 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.22■□□□□ 0.19
GDNFP39905 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.22■□□□□ 0.19
GDNFP39905 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.22■□□□□ 0.19
GDNFP39905 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
GDNFP39905 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.22■□□□□ 0.19
GDNFP39905 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.22■□□□□ 0.19
GDNFP39905 UNC93B5-201ENST00000530315 699 ntBASIC16.22■□□□□ 0.19
GDNFP39905 KRT18P6-201ENST00000555540 1265 ntBASIC16.22■□□□□ 0.19
GDNFP39905 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.22■□□□□ 0.19
GDNFP39905 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
GDNFP39905 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.22■□□□□ 0.19
GDNFP39905 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.22■□□□□ 0.19
GDNFP39905 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
GDNFP39905 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.22■□□□□ 0.19
GDNFP39905 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.22■□□□□ 0.19
GDNFP39905 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms