Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.82■□□□□ 0.6
XPAP23025 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
XPAP23025 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.81■□□□□ 0.6
XPAP23025 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 HOMER2P1-201ENST00000455653 964 ntBASIC18.81■□□□□ 0.6
XPAP23025 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 AC063952.2-201ENST00000498792 1227 ntBASIC18.81■□□□□ 0.6
XPAP23025 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.81■□□□□ 0.6
XPAP23025 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.81■□□□□ 0.6
XPAP23025 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.81■□□□□ 0.6
XPAP23025 AC087388.1-201ENST00000571370 1112 ntBASIC18.81■□□□□ 0.6
XPAP23025 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.81■□□□□ 0.6
XPAP23025 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
XPAP23025 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
XPAP23025 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
XPAP23025 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.8■□□□□ 0.6
XPAP23025 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.8■□□□□ 0.6
XPAP23025 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.8■□□□□ 0.6
XPAP23025 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.8■□□□□ 0.6
XPAP23025 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
XPAP23025 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
XPAP23025 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.8■□□□□ 0.6
XPAP23025 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.8■□□□□ 0.6
XPAP23025 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.8■□□□□ 0.6
XPAP23025 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.8■□□□□ 0.6
XPAP23025 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.8■□□□□ 0.6
XPAP23025 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.8■□□□□ 0.6
XPAP23025 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.8■□□□□ 0.6
XPAP23025 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.8■□□□□ 0.6
XPAP23025 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 KRT18P35-201ENST00000510488 1269 ntBASIC18.8■□□□□ 0.6
XPAP23025 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.8■□□□□ 0.6
XPAP23025 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 AL441883.1-201ENST00000566170 1045 ntBASIC18.8■□□□□ 0.6
XPAP23025 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.8■□□□□ 0.6
XPAP23025 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 AL445228.2-201ENST00000605589 952 ntBASIC18.8■□□□□ 0.6
XPAP23025 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
XPAP23025 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
XPAP23025 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
XPAP23025 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.79■□□□□ 0.6
XPAP23025 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.79■□□□□ 0.6
XPAP23025 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.79■□□□□ 0.6
XPAP23025 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
XPAP23025 AC112497.1-201ENST00000624824 639 ntBASIC18.79■□□□□ 0.6
XPAP23025 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
XPAP23025 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.79■□□□□ 0.6
XPAP23025 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.79■□□□□ 0.6
XPAP23025 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.79■□□□□ 0.6
XPAP23025 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
XPAP23025 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
XPAP23025 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.78■□□□□ 0.6
XPAP23025 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms