Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.75■□□□□ 0.59
VCLP18206 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.75■□□□□ 0.59
VCLP18206 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
VCLP18206 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.75■□□□□ 0.59
VCLP18206 SLC25A1P2-201ENST00000430693 912 ntBASIC18.75■□□□□ 0.59
VCLP18206 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.75■□□□□ 0.59
VCLP18206 EGLN1P1-201ENST00000531623 762 ntBASIC18.75■□□□□ 0.59
VCLP18206 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.75■□□□□ 0.59
VCLP18206 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.75■□□□□ 0.59
VCLP18206 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
VCLP18206 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VCLP18206 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.75■□□□□ 0.59
VCLP18206 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.75■□□□□ 0.59
VCLP18206 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.75■□□□□ 0.59
VCLP18206 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VCLP18206 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.74■□□□□ 0.59
VCLP18206 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.74■□□□□ 0.59
VCLP18206 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.74■□□□□ 0.59
VCLP18206 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.74■□□□□ 0.59
VCLP18206 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 FP475955.4-201ENST00000623131 1990 ntBASIC18.74■□□□□ 0.59
VCLP18206 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.74■□□□□ 0.59
VCLP18206 CA15P1-201ENST00000481698 905 ntBASIC18.74■□□□□ 0.59
VCLP18206 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 AC145285.6-201ENST00000604632 637 ntBASIC18.74■□□□□ 0.59
VCLP18206 AC116562.4-202ENST00000641738 218 ntBASIC18.74■□□□□ 0.59
VCLP18206 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
VCLP18206 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
VCLP18206 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 IRX1P1-201ENST00000438849 1838 ntBASIC18.74■□□□□ 0.59
VCLP18206 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
VCLP18206 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 KRT8P9-201ENST00000558927 1449 ntBASIC18.74■□□□□ 0.59
VCLP18206 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VCLP18206 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
VCLP18206 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.73■□□□□ 0.59
VCLP18206 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 TSPY14P-201ENST00000303979 915 ntBASIC18.73■□□□□ 0.59
VCLP18206 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.73■□□□□ 0.59
VCLP18206 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.73■□□□□ 0.59
VCLP18206 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 AC097493.4-201ENST00000641197 219 ntBASIC18.73■□□□□ 0.59
VCLP18206 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.73■□□□□ 0.59
VCLP18206 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VCLP18206 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
VCLP18206 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.72■□□□□ 0.59
VCLP18206 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
VCLP18206 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCLP18206 CYP2D8P-201ENST00000433633 1490 ntBASIC18.72■□□□□ 0.59
VCLP18206 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
VCLP18206 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms