Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PTPN1P18031 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.74■□□□□ 0.75
PTPN1P18031 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 SPDYE15P-201ENST00000424157 909 ntBASIC19.74■□□□□ 0.75
PTPN1P18031 RASA4DP-201ENST00000460726 1199 ntBASIC19.74■□□□□ 0.75
PTPN1P18031 AC034232.1-201ENST00000506026 1064 ntBASIC19.74■□□□□ 0.75
PTPN1P18031 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTPN1P18031 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.74■□□□□ 0.75
PTPN1P18031 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTPN1P18031 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTPN1P18031 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN1P18031 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN1P18031 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PTPN1P18031 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.74■□□□□ 0.75
PTPN1P18031 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN1P18031 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN1P18031 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PTPN1P18031 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN1P18031 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PTPN1P18031 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN1P18031 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN1P18031 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN1P18031 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN1P18031 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.73■□□□□ 0.75
PTPN1P18031 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN1P18031 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN1P18031 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN1P18031 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN1P18031 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN1P18031 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN1P18031 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 AL031133.1-201ENST00000406807 723 ntBASIC19.72■□□□□ 0.75
PTPN1P18031 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
PTPN1P18031 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.72■□□□□ 0.75
PTPN1P18031 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 MIR3917-201ENST00000580971 93 ntBASIC19.72■□□□□ 0.75
PTPN1P18031 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN1P18031 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
PTPN1P18031 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN1P18031 AC120498.9-201ENST00000339021 3867 ntBASIC19.72■□□□□ 0.75
PTPN1P18031 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN1P18031 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN1P18031 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN1P18031 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN1P18031 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.71■□□□□ 0.75
PTPN1P18031 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 AC112907.2-201ENST00000448639 330 ntBASIC19.71■□□□□ 0.75
PTPN1P18031 AL671277.2-201ENST00000458060 996 ntBASIC19.71■□□□□ 0.75
PTPN1P18031 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.71■□□□□ 0.75
PTPN1P18031 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.71■□□□□ 0.75
PTPN1P18031 KRT18P41-201ENST00000518924 1277 ntBASIC19.71■□□□□ 0.75
PTPN1P18031 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
PTPN1P18031 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PTPN1P18031 AC010240.3-201ENST00000607688 395 ntBASIC19.71■□□□□ 0.75
PTPN1P18031 AL157888.1-201ENST00000631930 593 ntBASIC19.71■□□□□ 0.75
PTPN1P18031 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.71■□□□□ 0.75
PTPN1P18031 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTPN1P18031 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms