Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 FZD10-202ENST00000539839 3282 ntBASIC15.85■□□□□ 0.13
HIST1H1DP16402 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 POM121L13P-201ENST00000422362 380 ntBASIC15.84■□□□□ 0.13
HIST1H1DP16402 POU5F1P3-201ENST00000428824 1078 ntBASIC15.84■□□□□ 0.13
HIST1H1DP16402 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 UNC93B4-201ENST00000505679 747 ntBASIC15.84■□□□□ 0.13
HIST1H1DP16402 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 AC098934.4-201ENST00000564127 592 ntBASIC15.84■□□□□ 0.13
HIST1H1DP16402 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 AC093677.2-201ENST00000600169 1863 ntBASIC15.84■□□□□ 0.13
HIST1H1DP16402 KRT8P45-201ENST00000414328 1447 ntBASIC15.84■□□□□ 0.13
HIST1H1DP16402 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HIST1H1DP16402 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
HIST1H1DP16402 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1DP16402 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1DP16402 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1DP16402 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
HIST1H1DP16402 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1DP16402 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1DP16402 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1DP16402 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
HIST1H1DP16402 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HIST1H1DP16402 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 Z85996.1-201ENST00000494644 937 ntBASIC15.83■□□□□ 0.12
HIST1H1DP16402 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
HIST1H1DP16402 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HIST1H1DP16402 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HIST1H1DP16402 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HIST1H1DP16402 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HIST1H1DP16402 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HIST1H1DP16402 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms