Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 AL391807.1-203ENST00000604392 2365 ntBASIC20.97■□□□□ 0.95
CYP3A4P08684 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CYP3A4P08684 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CYP3A4P08684 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.97■□□□□ 0.95
CYP3A4P08684 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.97■□□□□ 0.95
CYP3A4P08684 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CYP3A4P08684 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CYP3A4P08684 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CYP3A4P08684 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CYP3A4P08684 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.96■□□□□ 0.95
CYP3A4P08684 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.96■□□□□ 0.95
CYP3A4P08684 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CYP3A4P08684 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.96■□□□□ 0.95
CYP3A4P08684 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.95■□□□□ 0.94
CYP3A4P08684 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CYP3A4P08684 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CYP3A4P08684 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CYP3A4P08684 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CYP3A4P08684 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CYP3A4P08684 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.95■□□□□ 0.94
CYP3A4P08684 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.95■□□□□ 0.94
CYP3A4P08684 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.95■□□□□ 0.94
CYP3A4P08684 AL136038.4-201ENST00000603606 1261 ntBASIC20.95■□□□□ 0.94
CYP3A4P08684 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CYP3A4P08684 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CYP3A4P08684 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CYP3A4P08684 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CYP3A4P08684 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CYP3A4P08684 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.95■□□□□ 0.94
CYP3A4P08684 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 AC098818.2-201ENST00000564925 2320 ntBASIC20.94■□□□□ 0.94
CYP3A4P08684 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.94■□□□□ 0.94
CYP3A4P08684 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.94■□□□□ 0.94
CYP3A4P08684 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.94■□□□□ 0.94
CYP3A4P08684 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.94■□□□□ 0.94
CYP3A4P08684 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.94■□□□□ 0.94
CYP3A4P08684 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.94■□□□□ 0.94
CYP3A4P08684 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.94■□□□□ 0.94
CYP3A4P08684 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CYP3A4P08684 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CYP3A4P08684 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CYP3A4P08684 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.93■□□□□ 0.94
CYP3A4P08684 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.93■□□□□ 0.94
CYP3A4P08684 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 MIR149-201ENST00000384879 89 ntBASIC20.93■□□□□ 0.94
CYP3A4P08684 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.93■□□□□ 0.94
CYP3A4P08684 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.93■□□□□ 0.94
CYP3A4P08684 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CYP3A4P08684 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.93■□□□□ 0.94
CYP3A4P08684 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.93■□□□□ 0.94
CYP3A4P08684 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
CYP3A4P08684 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.93■□□□□ 0.94
CYP3A4P08684 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CYP3A4P08684 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CYP3A4P08684 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CYP3A4P08684 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CYP3A4P08684 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.92■□□□□ 0.94
CYP3A4P08684 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.92■□□□□ 0.94
CYP3A4P08684 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.92■□□□□ 0.94
CYP3A4P08684 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.92■□□□□ 0.94
CYP3A4P08684 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CYP3A4P08684 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.92■□□□□ 0.94
CYP3A4P08684 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CYP3A4P08684 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms