Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.18■□□□□ 0.34
THBS1P07996 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.18■□□□□ 0.34
THBS1P07996 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
THBS1P07996 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.17■□□□□ 0.34
THBS1P07996 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.17■□□□□ 0.34
THBS1P07996 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 AL023284.2-201ENST00000405850 579 ntBASIC17.17■□□□□ 0.34
THBS1P07996 AL355355.2-201ENST00000442321 338 ntBASIC17.17■□□□□ 0.34
THBS1P07996 MCCD1P1-208ENST00000445732 328 ntBASIC17.17■□□□□ 0.34
THBS1P07996 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
THBS1P07996 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.17■□□□□ 0.34
THBS1P07996 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.17■□□□□ 0.34
THBS1P07996 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.17■□□□□ 0.34
THBS1P07996 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
THBS1P07996 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.17■□□□□ 0.34
THBS1P07996 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
THBS1P07996 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
THBS1P07996 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
THBS1P07996 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
THBS1P07996 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 MYLKP1-201ENST00000509077 1580 ntBASIC17.16■□□□□ 0.34
THBS1P07996 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.16■□□□□ 0.34
THBS1P07996 MIR564-202ENST00000385049 94 ntBASIC17.16■□□□□ 0.34
THBS1P07996 AP000593.1-201ENST00000393668 712 ntBASIC17.16■□□□□ 0.34
THBS1P07996 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.16■□□□□ 0.34
THBS1P07996 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.16■□□□□ 0.34
THBS1P07996 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.16■□□□□ 0.34
THBS1P07996 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.16■□□□□ 0.34
THBS1P07996 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.16■□□□□ 0.34
THBS1P07996 AC026471.5-201ENST00000615068 467 ntBASIC17.16■□□□□ 0.34
THBS1P07996 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
THBS1P07996 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
THBS1P07996 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
THBS1P07996 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
THBS1P07996 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
THBS1P07996 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
THBS1P07996 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
THBS1P07996 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
THBS1P07996 ABALON-201ENST00000629058 1903 ntBASIC17.15■□□□□ 0.34
THBS1P07996 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
THBS1P07996 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.15■□□□□ 0.34
THBS1P07996 AP005242.2-201ENST00000580065 1175 ntBASIC17.15■□□□□ 0.34
THBS1P07996 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.15■□□□□ 0.34
THBS1P07996 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.15■□□□□ 0.34
THBS1P07996 GPAT2P1-201ENST00000444924 1672 ntBASIC17.15■□□□□ 0.34
THBS1P07996 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
THBS1P07996 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.15■□□□□ 0.34
THBS1P07996 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS1P07996 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
THBS1P07996 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms