Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC20.43■□□□□ 0.86
VTNP04004 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.43■□□□□ 0.86
VTNP04004 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.43■□□□□ 0.86
VTNP04004 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.43■□□□□ 0.86
VTNP04004 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VTNP04004 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.43■□□□□ 0.86
VTNP04004 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
VTNP04004 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
VTNP04004 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.43■□□□□ 0.86
VTNP04004 AC093525.10-201ENST00000625130 1569 ntBASIC20.42■□□□□ 0.86
VTNP04004 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.42■□□□□ 0.86
VTNP04004 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.42■□□□□ 0.86
VTNP04004 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.42■□□□□ 0.86
VTNP04004 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.42■□□□□ 0.86
VTNP04004 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
VTNP04004 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.42■□□□□ 0.86
VTNP04004 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VTNP04004 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.42■□□□□ 0.86
VTNP04004 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.42■□□□□ 0.86
VTNP04004 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VTNP04004 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
VTNP04004 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 PVRIG2P-201ENST00000435460 978 ntBASIC20.41■□□□□ 0.86
VTNP04004 AP002383.4-201ENST00000442518 975 ntBASIC20.41■□□□□ 0.86
VTNP04004 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.41■□□□□ 0.86
VTNP04004 AL121894.2-201ENST00000602977 491 ntBASIC20.41■□□□□ 0.86
VTNP04004 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
VTNP04004 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.41■□□□□ 0.86
VTNP04004 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.41■□□□□ 0.86
VTNP04004 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.41■□□□□ 0.86
VTNP04004 KRT8P50-201ENST00000562022 1438 ntBASIC20.41■□□□□ 0.86
VTNP04004 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VTNP04004 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.41■□□□□ 0.86
VTNP04004 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VTNP04004 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
VTNP04004 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VTNP04004 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTNP04004 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTNP04004 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VTNP04004 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VTNP04004 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VTNP04004 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.4■□□□□ 0.86
VTNP04004 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTNP04004 TSPY22P-201ENST00000427496 604 ntBASIC20.4■□□□□ 0.86
VTNP04004 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.4■□□□□ 0.86
VTNP04004 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.4■□□□□ 0.86
VTNP04004 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.4■□□□□ 0.86
VTNP04004 KRT8P26-201ENST00000534154 1276 ntBASIC20.4■□□□□ 0.86
VTNP04004 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VTNP04004 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.4■□□□□ 0.86
VTNP04004 AC092329.2-201ENST00000598402 547 ntBASIC20.4■□□□□ 0.86
VTNP04004 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.4■□□□□ 0.86
VTNP04004 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VTNP04004 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
VTNP04004 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VTNP04004 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VTNP04004 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VTNP04004 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.39■□□□□ 0.85
VTNP04004 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.39■□□□□ 0.85
VTNP04004 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VTNP04004 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.39■□□□□ 0.85
VTNP04004 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.39■□□□□ 0.85
VTNP04004 MIR3180-1-201ENST00000580374 94 ntBASIC20.39■□□□□ 0.85
VTNP04004 MIR3180-3-201ENST00000584616 94 ntBASIC20.39■□□□□ 0.85
VTNP04004 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VTNP04004 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
VTNP04004 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms