Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
COL1A1P02452 Z83836.1-201ENST00000624605 1642 ntBASIC22.44■■□□□ 1.18
COL1A1P02452 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.43■■□□□ 1.18
COL1A1P02452 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.43■■□□□ 1.18
COL1A1P02452 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
COL1A1P02452 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.43■■□□□ 1.18
COL1A1P02452 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.43■■□□□ 1.18
COL1A1P02452 TSPY22P-201ENST00000427496 604 ntBASIC22.43■■□□□ 1.18
COL1A1P02452 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
COL1A1P02452 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.43■■□□□ 1.18
COL1A1P02452 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.43■■□□□ 1.18
COL1A1P02452 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC22.43■■□□□ 1.18
COL1A1P02452 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC22.43■■□□□ 1.18
COL1A1P02452 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COL1A1P02452 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
COL1A1P02452 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
COL1A1P02452 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.42■■□□□ 1.18
COL1A1P02452 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.42■■□□□ 1.18
COL1A1P02452 NAA38-203ENST00000575071 553 ntTSL 2 BASIC22.42■■□□□ 1.18
COL1A1P02452 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
COL1A1P02452 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.42■■□□□ 1.18
COL1A1P02452 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC22.42■■□□□ 1.18
COL1A1P02452 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
COL1A1P02452 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC22.42■■□□□ 1.18
COL1A1P02452 KRT18P1-202ENST00000452408 1331 ntBASIC22.42■■□□□ 1.18
COL1A1P02452 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COL1A1P02452 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.41■■□□□ 1.18
COL1A1P02452 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 TSPY19P-201ENST00000418461 509 ntBASIC22.41■■□□□ 1.18
COL1A1P02452 TSPY18P-201ENST00000441642 509 ntBASIC22.41■■□□□ 1.18
COL1A1P02452 AC012615.1-201ENST00000565797 1299 ntBASIC22.41■■□□□ 1.18
COL1A1P02452 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.41■■□□□ 1.18
COL1A1P02452 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COL1A1P02452 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC22.41■■□□□ 1.18
COL1A1P02452 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC22.41■■□□□ 1.18
COL1A1P02452 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 AP000347.1-202ENST00000435868 847 ntBASIC22.41■■□□□ 1.18
COL1A1P02452 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
COL1A1P02452 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.41■■□□□ 1.18
COL1A1P02452 AL031008.1-201ENST00000619963 541 ntBASIC22.41■■□□□ 1.18
COL1A1P02452 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.41■■□□□ 1.18
COL1A1P02452 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.41■■□□□ 1.18
COL1A1P02452 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.41■■□□□ 1.18
COL1A1P02452 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
COL1A1P02452 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A1P02452 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A1P02452 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 UROS-202ENST00000368778 1556 ntTSL 2 BASIC22.4■■□□□ 1.18
COL1A1P02452 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
COL1A1P02452 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC22.4■■□□□ 1.18
COL1A1P02452 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COL1A1P02452 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.4■■□□□ 1.18
COL1A1P02452 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
COL1A1P02452 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A1P02452 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
COL1A1P02452 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms