Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
IFNA1P01562 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
IFNA1P01562 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
IFNA1P01562 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
IFNA1P01562 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
IFNA1P01562 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.78□□□□□ -0.04
IFNA1P01562 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.77□□□□□ -0.04
IFNA1P01562 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.77□□□□□ -0.04
IFNA1P01562 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
IFNA1P01562 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.77□□□□□ -0.04
IFNA1P01562 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
IFNA1P01562 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.77□□□□□ -0.04
IFNA1P01562 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
IFNA1P01562 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.77□□□□□ -0.04
IFNA1P01562 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.77□□□□□ -0.05
IFNA1P01562 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 AC138028.4-201ENST00000564984 1845 ntBASIC14.77□□□□□ -0.05
IFNA1P01562 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.77□□□□□ -0.05
IFNA1P01562 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.77□□□□□ -0.05
IFNA1P01562 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC14.77□□□□□ -0.05
IFNA1P01562 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.77□□□□□ -0.05
IFNA1P01562 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.77□□□□□ -0.05
IFNA1P01562 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
IFNA1P01562 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
IFNA1P01562 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IFNA1P01562 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IFNA1P01562 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
IFNA1P01562 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.76□□□□□ -0.05
IFNA1P01562 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC14.76□□□□□ -0.05
IFNA1P01562 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IFNA1P01562 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.76□□□□□ -0.05
IFNA1P01562 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
IFNA1P01562 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
IFNA1P01562 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.76□□□□□ -0.05
IFNA1P01562 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
IFNA1P01562 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
IFNA1P01562 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
IFNA1P01562 AC007326.2-201ENST00000624224 7579 ntBASIC14.75□□□□□ -0.05
IFNA1P01562 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.75□□□□□ -0.05
IFNA1P01562 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.75□□□□□ -0.05
IFNA1P01562 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
IFNA1P01562 AD000864.1-201ENST00000624076 2295 ntBASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms