Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
GPC4O75487 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 FAM207BP-201ENST00000447172 505 ntBASIC18.71■□□□□ 0.59
GPC4O75487 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC4O75487 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC4O75487 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
GPC4O75487 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 DGCR10-201ENST00000609839 495 ntBASIC18.71■□□□□ 0.59
GPC4O75487 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
GPC4O75487 AC026471.1-201ENST00000564629 3026 ntBASIC18.71■□□□□ 0.59
GPC4O75487 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
GPC4O75487 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.71■□□□□ 0.59
GPC4O75487 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GPC4O75487 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.7■□□□□ 0.58
GPC4O75487 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.7■□□□□ 0.58
GPC4O75487 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.7■□□□□ 0.58
GPC4O75487 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.7■□□□□ 0.58
GPC4O75487 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.7■□□□□ 0.58
GPC4O75487 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GPC4O75487 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
GPC4O75487 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.7■□□□□ 0.58
GPC4O75487 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
GPC4O75487 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.69■□□□□ 0.58
GPC4O75487 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
GPC4O75487 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GPC4O75487 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GPC4O75487 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC4O75487 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC4O75487 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC4O75487 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GPC4O75487 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC4O75487 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
GPC4O75487 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.69■□□□□ 0.58
GPC4O75487 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.69■□□□□ 0.58
GPC4O75487 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.69■□□□□ 0.58
GPC4O75487 CKBP1-201ENST00000565489 1086 ntBASIC18.69■□□□□ 0.58
GPC4O75487 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC4O75487 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 KRT17P2-201ENST00000300992 1314 ntBASIC18.69■□□□□ 0.58
GPC4O75487 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC4O75487 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GPC4O75487 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GPC4O75487 AC096733.2-201ENST00000609937 1394 ntBASIC18.68■□□□□ 0.58
GPC4O75487 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GPC4O75487 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 AC009113.1-201ENST00000570267 2443 ntBASIC18.68■□□□□ 0.58
GPC4O75487 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC4O75487 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
GPC4O75487 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms