Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH4O75427 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH4O75427 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LRCH4O75427 KRT8P9-201ENST00000558927 1449 ntBASIC19.42■□□□□ 0.7
LRCH4O75427 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.41■□□□□ 0.7
LRCH4O75427 AC007613.1-201ENST00000572811 2597 ntBASIC19.41■□□□□ 0.7
LRCH4O75427 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRCH4O75427 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LRCH4O75427 MYLKP1-201ENST00000509077 1580 ntBASIC19.41■□□□□ 0.7
LRCH4O75427 AC036111.1-201ENST00000533973 1582 ntBASIC19.41■□□□□ 0.7
LRCH4O75427 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.41■□□□□ 0.7
LRCH4O75427 AL596275.1-201ENST00000423464 877 ntBASIC19.41■□□□□ 0.7
LRCH4O75427 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.41■□□□□ 0.7
LRCH4O75427 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.41■□□□□ 0.7
LRCH4O75427 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.41■□□□□ 0.7
LRCH4O75427 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.41■□□□□ 0.7
LRCH4O75427 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.41■□□□□ 0.7
LRCH4O75427 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.41■□□□□ 0.7
LRCH4O75427 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.41■□□□□ 0.7
LRCH4O75427 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.41■□□□□ 0.7
LRCH4O75427 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.41■□□□□ 0.7
LRCH4O75427 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
LRCH4O75427 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRCH4O75427 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 AC034236.2-201ENST00000606662 1610 ntBASIC19.4■□□□□ 0.7
LRCH4O75427 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.4■□□□□ 0.7
LRCH4O75427 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 AL354751.1-201ENST00000412768 1863 ntBASIC19.4■□□□□ 0.7
LRCH4O75427 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.4■□□□□ 0.7
LRCH4O75427 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.4■□□□□ 0.7
LRCH4O75427 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.4■□□□□ 0.7
LRCH4O75427 AC007663.1-201ENST00000438948 1240 ntBASIC19.4■□□□□ 0.7
LRCH4O75427 CCR12P-201ENST00000446203 998 ntBASIC19.4■□□□□ 0.7
LRCH4O75427 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.4■□□□□ 0.7
LRCH4O75427 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRCH4O75427 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
LRCH4O75427 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
LRCH4O75427 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRCH4O75427 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.4■□□□□ 0.7
LRCH4O75427 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
LRCH4O75427 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRCH4O75427 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRCH4O75427 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.39■□□□□ 0.7
LRCH4O75427 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRCH4O75427 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
LRCH4O75427 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
LRCH4O75427 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.39■□□□□ 0.69
LRCH4O75427 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH4O75427 AL390961.4-201ENST00000623958 2535 ntBASIC19.39■□□□□ 0.69
LRCH4O75427 TSPY14P-201ENST00000303979 915 ntBASIC19.39■□□□□ 0.69
LRCH4O75427 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.39■□□□□ 0.69
LRCH4O75427 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 C2orf69P3-201ENST00000565542 1120 ntBASIC19.39■□□□□ 0.69
LRCH4O75427 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
LRCH4O75427 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LRCH4O75427 AIRN-201ENST00000601203 4374 ntBASIC19.39■□□□□ 0.69
LRCH4O75427 CYP2D8P-201ENST00000433633 1490 ntBASIC19.39■□□□□ 0.69
LRCH4O75427 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.39■□□□□ 0.69
LRCH4O75427 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRCH4O75427 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LRCH4O75427 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.39■□□□□ 0.69
LRCH4O75427 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH4O75427 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH4O75427 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH4O75427 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH4O75427 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH4O75427 INGX-201ENST00000359239 846 ntBASIC19.38■□□□□ 0.69
LRCH4O75427 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
LRCH4O75427 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRCH4O75427 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms