Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.92■□□□□ 0.3
SSX4O60224 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX4O60224 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX4O60224 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX4O60224 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SSX4O60224 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 AC090340.1-201ENST00000620778 4980 ntBASIC16.91■□□□□ 0.3
SSX4O60224 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SSX4O60224 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.91■□□□□ 0.3
SSX4O60224 AL355355.2-201ENST00000442321 338 ntBASIC16.91■□□□□ 0.3
SSX4O60224 KRT16P5-201ENST00000455284 522 ntBASIC16.91■□□□□ 0.3
SSX4O60224 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.91■□□□□ 0.3
SSX4O60224 AC026471.5-201ENST00000615068 467 ntBASIC16.91■□□□□ 0.3
SSX4O60224 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.91■□□□□ 0.3
SSX4O60224 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SSX4O60224 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SSX4O60224 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.91■□□□□ 0.3
SSX4O60224 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SSX4O60224 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.9■□□□□ 0.3
SSX4O60224 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.9■□□□□ 0.3
SSX4O60224 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
SSX4O60224 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.9■□□□□ 0.3
SSX4O60224 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.9■□□□□ 0.3
SSX4O60224 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.9■□□□□ 0.3
SSX4O60224 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 AL121906.2-201ENST00000621597 723 ntBASIC16.9■□□□□ 0.3
SSX4O60224 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 AC008894.3-201ENST00000624324 3103 ntBASIC16.9■□□□□ 0.3
SSX4O60224 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SSX4O60224 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SSX4O60224 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SSX4O60224 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
SSX4O60224 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.89■□□□□ 0.3
SSX4O60224 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.89■□□□□ 0.3
SSX4O60224 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SSX4O60224 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX4O60224 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SSX4O60224 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSX4O60224 AC084018.2-201ENST00000613093 2607 ntBASIC16.89■□□□□ 0.29
SSX4O60224 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX4O60224 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.89■□□□□ 0.29
SSX4O60224 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.89■□□□□ 0.29
SSX4O60224 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SSX4O60224 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.89■□□□□ 0.29
SSX4O60224 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SSX4O60224 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX4O60224 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.89■□□□□ 0.29
SSX4O60224 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms