Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KCNQ3O43525 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KCNQ3O43525 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC23.91■■□□□ 1.42
KCNQ3O43525 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KCNQ3O43525 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KCNQ3O43525 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
KCNQ3O43525 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KCNQ3O43525 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
KCNQ3O43525 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.9■■□□□ 1.42
KCNQ3O43525 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KCNQ3O43525 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
KCNQ3O43525 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KCNQ3O43525 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.9■■□□□ 1.42
KCNQ3O43525 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC23.9■■□□□ 1.42
KCNQ3O43525 TPM4P1-201ENST00000436100 807 ntBASIC23.9■■□□□ 1.42
KCNQ3O43525 REEP1-209ENST00000541910 969 ntTSL 2 BASIC23.9■■□□□ 1.42
KCNQ3O43525 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC23.9■■□□□ 1.42
KCNQ3O43525 TBCB-205ENST00000585746 875 ntTSL 3 BASIC23.9■■□□□ 1.42
KCNQ3O43525 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC23.9■■□□□ 1.42
KCNQ3O43525 TEN1-204ENST00000588202 862 ntTSL 3 BASIC23.9■■□□□ 1.42
KCNQ3O43525 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.9■■□□□ 1.42
KCNQ3O43525 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
KCNQ3O43525 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KCNQ3O43525 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
KCNQ3O43525 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.9■■□□□ 1.42
KCNQ3O43525 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KCNQ3O43525 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.89■■□□□ 1.42
KCNQ3O43525 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC23.89■■□□□ 1.42
KCNQ3O43525 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC23.89■■□□□ 1.42
KCNQ3O43525 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
KCNQ3O43525 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
KCNQ3O43525 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KCNQ3O43525 DRAXINP1-201ENST00000437611 948 ntBASIC23.89■■□□□ 1.41
KCNQ3O43525 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC23.89■■□□□ 1.41
KCNQ3O43525 PRELID1P1-202ENST00000567272 903 ntBASIC23.89■■□□□ 1.41
KCNQ3O43525 MIR3180-4-201ENST00000582223 153 ntBASIC23.89■■□□□ 1.41
KCNQ3O43525 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
KCNQ3O43525 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.89■■□□□ 1.41
KCNQ3O43525 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.89■■□□□ 1.41
KCNQ3O43525 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
KCNQ3O43525 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.89■■□□□ 1.41
KCNQ3O43525 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
KCNQ3O43525 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.88■■□□□ 1.41
KCNQ3O43525 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
KCNQ3O43525 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.88■■□□□ 1.41
KCNQ3O43525 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 LINC00265-3P-201ENST00000447588 903 ntBASIC23.88■■□□□ 1.41
KCNQ3O43525 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC23.88■■□□□ 1.41
KCNQ3O43525 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC23.88■■□□□ 1.41
KCNQ3O43525 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.88■■□□□ 1.41
KCNQ3O43525 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.88■■□□□ 1.41
KCNQ3O43525 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
KCNQ3O43525 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.88■■□□□ 1.41
KCNQ3O43525 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.88■■□□□ 1.41
KCNQ3O43525 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KCNQ3O43525 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
KCNQ3O43525 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
KCNQ3O43525 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 AC246785.2-201ENST00000432512 513 ntBASIC23.87■■□□□ 1.41
KCNQ3O43525 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC23.87■■□□□ 1.41
KCNQ3O43525 TOB2P1-201ENST00000469761 992 ntBASIC23.87■■□□□ 1.41
KCNQ3O43525 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.87■■□□□ 1.41
KCNQ3O43525 RN7SL510P-201ENST00000581311 263 ntBASIC23.87■■□□□ 1.41
KCNQ3O43525 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC23.87■■□□□ 1.41
KCNQ3O43525 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
KCNQ3O43525 AL732292.2-201ENST00000609649 430 ntBASIC23.87■■□□□ 1.41
KCNQ3O43525 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
KCNQ3O43525 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
KCNQ3O43525 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC23.87■■□□□ 1.41
KCNQ3O43525 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KCNQ3O43525 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC23.87■■□□□ 1.41
KCNQ3O43525 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
KCNQ3O43525 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KCNQ3O43525 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.86■■□□□ 1.41
KCNQ3O43525 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
KCNQ3O43525 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC23.86■■□□□ 1.41
KCNQ3O43525 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNQ3O43525 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.86■■□□□ 1.41
KCNQ3O43525 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
KCNQ3O43525 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms