Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.94■□□□□ 0.3
SMAD9O15198 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD9O15198 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SMAD9O15198 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
SMAD9O15198 AL049812.1-201ENST00000432563 2267 ntBASIC16.94■□□□□ 0.3
SMAD9O15198 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD9O15198 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMAD9O15198 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.94■□□□□ 0.3
SMAD9O15198 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD9O15198 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD9O15198 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 EGLN1P1-201ENST00000531623 762 ntBASIC16.93■□□□□ 0.3
SMAD9O15198 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.93■□□□□ 0.3
SMAD9O15198 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.93■□□□□ 0.3
SMAD9O15198 AC133561.5-201ENST00000635547 218 ntBASIC16.93■□□□□ 0.3
SMAD9O15198 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.93■□□□□ 0.3
SMAD9O15198 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMAD9O15198 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.92■□□□□ 0.3
SMAD9O15198 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMAD9O15198 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMAD9O15198 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SMAD9O15198 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SMAD9O15198 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD9O15198 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.92■□□□□ 0.3
SMAD9O15198 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.92■□□□□ 0.3
SMAD9O15198 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 AC093503.3-201ENST00000624917 2352 ntBASIC16.92■□□□□ 0.3
SMAD9O15198 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD9O15198 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD9O15198 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
SMAD9O15198 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.92■□□□□ 0.3
SMAD9O15198 AL023803.3-201ENST00000615559 522 ntBASIC16.92■□□□□ 0.3
SMAD9O15198 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SMAD9O15198 AC005332.8-201ENST00000622750 2735 ntBASIC16.92■□□□□ 0.3
SMAD9O15198 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.92■□□□□ 0.3
SMAD9O15198 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SMAD9O15198 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SMAD9O15198 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 LINC01568-207ENST00000641790 1380 ntBASIC16.91■□□□□ 0.3
SMAD9O15198 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SMAD9O15198 KRT8P3-201ENST00000519669 1449 ntBASIC16.91■□□□□ 0.3
SMAD9O15198 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SMAD9O15198 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms