Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC106028.4-201ENST00000614509 607 ntBASIC30.15■■■□□ 2.42
CHD1O14646 MIR1199-201ENST00000621445 119 ntBASIC30.15■■■□□ 2.42
CHD1O14646 AL356309.3-201ENST00000624132 1934 ntBASIC30.15■■■□□ 2.42
CHD1O14646 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC30.14■■■□□ 2.42
CHD1O14646 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC30.14■■■□□ 2.42
CHD1O14646 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD1O14646 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
CHD1O14646 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC30.14■■■□□ 2.42
CHD1O14646 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC30.14■■■□□ 2.42
CHD1O14646 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD1O14646 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CHD1O14646 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC30.14■■■□□ 2.42
CHD1O14646 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
CHD1O14646 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC30.13■■■□□ 2.41
CHD1O14646 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 AC105339.3-201ENST00000560043 636 ntBASIC30.13■■■□□ 2.41
CHD1O14646 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC30.13■■■□□ 2.41
CHD1O14646 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
CHD1O14646 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC30.13■■■□□ 2.41
CHD1O14646 ME2-216ENST00000639850 2331 ntTSL 5 BASIC30.13■■■□□ 2.41
CHD1O14646 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CHD1O14646 RNF151-202ENST00000569210 853 ntTSL 2 BASIC30.13■■■□□ 2.41
CHD1O14646 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC30.13■■■□□ 2.41
CHD1O14646 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC30.12■■■□□ 2.41
CHD1O14646 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1O14646 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1O14646 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1O14646 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.12■■■□□ 2.41
CHD1O14646 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1O14646 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1O14646 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC30.12■■■□□ 2.41
CHD1O14646 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC30.12■■■□□ 2.41
CHD1O14646 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC30.12■■■□□ 2.41
CHD1O14646 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1O14646 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CHD1O14646 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC30.12■■■□□ 2.41
CHD1O14646 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC30.12■■■□□ 2.41
CHD1O14646 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC30.12■■■□□ 2.41
CHD1O14646 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC30.11■■■□□ 2.41
CHD1O14646 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1O14646 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1O14646 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1O14646 AC113404.2-201ENST00000507884 177 ntBASIC30.11■■■□□ 2.41
CHD1O14646 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
CHD1O14646 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC30.11■■■□□ 2.41
CHD1O14646 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC30.11■■■□□ 2.41
CHD1O14646 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1O14646 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC30.11■■■□□ 2.41
CHD1O14646 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1O14646 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
CHD1O14646 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1O14646 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC30.11■■■□□ 2.41
CHD1O14646 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CHD1O14646 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1O14646 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC30.1■■■□□ 2.41
CHD1O14646 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC30.1■■■□□ 2.41
CHD1O14646 CNN2P11-201ENST00000429351 262 ntBASIC30.1■■■□□ 2.41
CHD1O14646 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC30.1■■■□□ 2.41
CHD1O14646 RPL28-205ENST00000558131 444 ntTSL 5 BASIC30.1■■■□□ 2.41
CHD1O14646 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC30.1■■■□□ 2.41
CHD1O14646 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
CHD1O14646 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1O14646 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC30.1■■■□□ 2.41
CHD1O14646 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1O14646 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1O14646 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC30.1■■■□□ 2.41
CHD1O14646 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1O14646 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC30.1■■■□□ 2.41
CHD1O14646 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CHD1O14646 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC30.1■■■□□ 2.41
CHD1O14646 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC30.1■■■□□ 2.41
CHD1O14646 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC30.1■■■□□ 2.41
CHD1O14646 PRR29-209ENST00000582540 967 ntTSL 2 BASIC30.1■■■□□ 2.41
CHD1O14646 AC011467.2-201ENST00000598425 242 ntBASIC30.1■■■□□ 2.41
CHD1O14646 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC30.1■■■□□ 2.41
CHD1O14646 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC30.1■■■□□ 2.41
CHD1O14646 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1O14646 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CHD1O14646 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC30.09■■■□□ 2.41
CHD1O14646 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHD1O14646 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CHD1O14646 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC30.09■■■□□ 2.41
CHD1O14646 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHD1O14646 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CHD1O14646 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CHD1O14646 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC30.08■■■□□ 2.41
CHD1O14646 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC30.08■■■□□ 2.41
CHD1O14646 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC30.08■■■□□ 2.41
CHD1O14646 COX5A-206ENST00000568783 571 ntTSL 3 BASIC30.08■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms