Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SOX1O00570 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.81■□□□□ 0.76
SOX1O00570 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.81■□□□□ 0.76
SOX1O00570 DUX4L17-201ENST00000557360 1267 ntBASIC19.81■□□□□ 0.76
SOX1O00570 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.81■□□□□ 0.76
SOX1O00570 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.81■□□□□ 0.76
SOX1O00570 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SOX1O00570 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SOX1O00570 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
SOX1O00570 AC104417.2-201ENST00000562989 1793 ntBASIC19.8■□□□□ 0.76
SOX1O00570 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SOX1O00570 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SOX1O00570 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
SOX1O00570 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.8■□□□□ 0.76
SOX1O00570 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.8■□□□□ 0.76
SOX1O00570 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.8■□□□□ 0.76
SOX1O00570 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC19.8■□□□□ 0.76
SOX1O00570 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.8■□□□□ 0.76
SOX1O00570 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.8■□□□□ 0.76
SOX1O00570 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SOX1O00570 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.8■□□□□ 0.76
SOX1O00570 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SOX1O00570 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.79■□□□□ 0.76
SOX1O00570 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SOX1O00570 AL356309.3-201ENST00000624132 1934 ntBASIC19.79■□□□□ 0.76
SOX1O00570 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SOX1O00570 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.79■□□□□ 0.76
SOX1O00570 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.79■□□□□ 0.76
SOX1O00570 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.79■□□□□ 0.76
SOX1O00570 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.79■□□□□ 0.76
SOX1O00570 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.79■□□□□ 0.76
SOX1O00570 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 AC007225.1-201ENST00000566331 1836 ntBASIC19.79■□□□□ 0.76
SOX1O00570 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SOX1O00570 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
SOX1O00570 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SOX1O00570 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.78■□□□□ 0.76
SOX1O00570 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.78■□□□□ 0.76
SOX1O00570 AL139400.1-201ENST00000366220 510 ntBASIC19.78■□□□□ 0.76
SOX1O00570 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.78■□□□□ 0.76
SOX1O00570 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.78■□□□□ 0.76
SOX1O00570 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.78■□□□□ 0.76
SOX1O00570 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.78■□□□□ 0.76
SOX1O00570 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.78■□□□□ 0.76
SOX1O00570 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.78■□□□□ 0.76
SOX1O00570 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.78■□□□□ 0.76
SOX1O00570 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.78■□□□□ 0.76
SOX1O00570 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.78■□□□□ 0.76
SOX1O00570 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 AC092865.6-201ENST00000642101 219 ntBASIC19.78■□□□□ 0.76
SOX1O00570 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.78■□□□□ 0.76
SOX1O00570 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SOX1O00570 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX1O00570 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX1O00570 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SOX1O00570 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX1O00570 INTS4P1-201ENST00000438455 1935 ntBASIC19.77■□□□□ 0.76
SOX1O00570 AC008556.1-201ENST00000610908 2040 ntBASIC19.77■□□□□ 0.76
SOX1O00570 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX1O00570 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.77■□□□□ 0.76
SOX1O00570 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.77■□□□□ 0.76
SOX1O00570 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX1O00570 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms