Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN5O00501 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN5O00501 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLDN5O00501 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 AL671277.2-201ENST00000458060 996 ntBASIC19.67■□□□□ 0.74
CLDN5O00501 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 AC092597.1-201ENST00000487352 616 ntBASIC19.67■□□□□ 0.74
CLDN5O00501 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN5O00501 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN5O00501 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.67■□□□□ 0.74
CLDN5O00501 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN5O00501 HYMAI.1-201ENST00000620949 238 ntBASIC19.67■□□□□ 0.74
CLDN5O00501 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN5O00501 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN5O00501 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN5O00501 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN5O00501 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN5O00501 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN5O00501 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN5O00501 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN5O00501 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN5O00501 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN5O00501 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
CLDN5O00501 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.66■□□□□ 0.74
CLDN5O00501 AC104390.1-201ENST00000555663 520 ntBASIC19.66■□□□□ 0.74
CLDN5O00501 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.66■□□□□ 0.74
CLDN5O00501 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN5O00501 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN5O00501 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
CLDN5O00501 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN5O00501 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN5O00501 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN5O00501 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLDN5O00501 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CLDN5O00501 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CLDN5O00501 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN5O00501 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN5O00501 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN5O00501 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN5O00501 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.65■□□□□ 0.74
CLDN5O00501 AC010240.3-201ENST00000607688 395 ntBASIC19.65■□□□□ 0.74
CLDN5O00501 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 KRT8P50-201ENST00000562022 1438 ntBASIC19.65■□□□□ 0.74
CLDN5O00501 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
CLDN5O00501 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN5O00501 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN5O00501 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.64■□□□□ 0.74
CLDN5O00501 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN5O00501 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN5O00501 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN5O00501 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN5O00501 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.64■□□□□ 0.73
CLDN5O00501 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN5O00501 MIR3917-201ENST00000580971 93 ntBASIC19.64■□□□□ 0.73
CLDN5O00501 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
CLDN5O00501 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms