Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA2E9PIF3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA2E9PIF3 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPIPA2E9PIF3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA2E9PIF3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17■□□□□ 0.31
NPIPA2E9PIF3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NPIPA2E9PIF3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 AC112907.2-201ENST00000448639 330 ntBASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 FAM86EP-206ENST00000510506 987 ntBASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 FEM1AP3-201ENST00000403722 1741 ntBASIC16.99■□□□□ 0.31
NPIPA2E9PIF3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 AL161938.1-201ENST00000569833 2180 ntBASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 GPAT2P1-201ENST00000444924 1672 ntBASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 IER3-202ENST00000376377 1350 ntBASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
NPIPA2E9PIF3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
NPIPA2E9PIF3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
NPIPA2E9PIF3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms