Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 AL160286.2-201ENST00000567150 934 ntBASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRDV1A0A1B0GX56 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 AC124067.4-201ENST00000519691 2379 ntBASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
TRDV1A0A1B0GX56 OR6D1P-202ENST00000641007 5290 ntBASIC16.39■□□□□ 0.22
TRDV1A0A1B0GX56 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.39■□□□□ 0.22
TRDV1A0A1B0GX56 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRDV1A0A1B0GX56 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRDV1A0A1B0GX56 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 AC141586.5-201ENST00000624546 2050 ntBASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 AC080080.1-201ENST00000625121 2420 ntBASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 AC006015.1-201ENST00000429970 570 ntBASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRDV1A0A1B0GX56 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms