Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 AL162741.1-201ENST00000565563 1558 ntBASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-4A0A1B0GX49 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC104581.1-202ENST00000635932 2618 ntBASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 MCCD1P1-208ENST00000445732 328 ntBASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 PENK-204ENST00000518770 863 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 KRT18P41-201ENST00000518924 1277 ntBASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC026471.5-201ENST00000615068 467 ntBASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 REXO1L10P-201ENST00000615707 1290 ntBASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 REXO1L12P-201ENST00000622156 912 ntBASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC135050.7-201ENST00000624508 2218 ntBASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-4A0A1B0GX49 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 AP000593.1-201ENST00000393668 712 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms