Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC005521.1-201ENST00000393351 872 ntBASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AP000523.1-201ENST00000398242 1049 ntBASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-4A0A0C4DH59 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 AC009113.1-201ENST00000570267 2443 ntBASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 AL163051.1-201ENST00000569214 1512 ntBASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 AL137013.1-201ENST00000432946 1228 ntBASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-4A0A0C4DH59 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-4A0A0C4DH59 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-4A0A0C4DH59 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-4A0A0C4DH59 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-4A0A0C4DH59 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.33■□□□□ 0.53
TRBV5-4A0A0C4DH59 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRBV5-4A0A0C4DH59 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.33■□□□□ 0.53
TRBV5-4A0A0C4DH59 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 LIN28AP1-201ENST00000429574 405 ntBASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-4A0A0C4DH59 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms