Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 RPS2P4-201ENST00000476944 856 ntBASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 FAM197Y4-202ENST00000622692 608 ntBASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV12-3A0A0B4J271 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 AC004980.1-204ENST00000429707 299 ntBASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 RPPH1-201ENST00000516869 333 ntBASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV12-3A0A0B4J271 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV12-3A0A0B4J271 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.9□□□□□ -0.19
TRAV12-3A0A0B4J271 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.9□□□□□ -0.19
TRAV12-3A0A0B4J271 KRT8P11-201ENST00000409686 1436 ntBASIC13.9□□□□□ -0.19
TRAV12-3A0A0B4J271 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV12-3A0A0B4J271 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 AL353807.1-201ENST00000427475 662 ntBASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 KSR1P1-201ENST00000446298 240 ntBASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 FAM201B-201ENST00000458407 597 ntBASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 CR392000.1-201ENST00000624770 1228 ntBASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV12-3A0A0B4J271 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms