Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 MFAP1P1-201ENST00000442257 1255 ntBASIC21.34■■□□□ 1.01
CLIC4Q9Y696 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 SLC25A1P4-201ENST00000567977 778 ntBASIC21.34■■□□□ 1.01
CLIC4Q9Y696 AC233702.5-201ENST00000584107 538 ntBASIC21.34■■□□□ 1.01
CLIC4Q9Y696 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 Z99916.2-201ENST00000604037 246 ntBASIC21.34■■□□□ 1.01
CLIC4Q9Y696 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 KRT8P45-201ENST00000414328 1447 ntBASIC21.34■■□□□ 1.01
CLIC4Q9Y696 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.34■■□□□ 1.01
CLIC4Q9Y696 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 AC079598.2-202ENST00000546624 1451 ntBASIC21.33■■□□□ 1.01
CLIC4Q9Y696 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 REXO1L10P-201ENST00000615707 1290 ntBASIC21.33■■□□□ 1.01
CLIC4Q9Y696 REXO1L12P-201ENST00000622156 912 ntBASIC21.33■■□□□ 1.01
CLIC4Q9Y696 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 AL049637.2-201ENST00000641778 930 ntBASIC21.33■■□□□ 1.01
CLIC4Q9Y696 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CLIC4Q9Y696 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CLIC4Q9Y696 ABALON-201ENST00000629058 1903 ntBASIC21.33■■□□□ 1
CLIC4Q9Y696 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC21.33■■□□□ 1
CLIC4Q9Y696 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CLIC4Q9Y696 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.32■■□□□ 1
CLIC4Q9Y696 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLIC4Q9Y696 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.32■■□□□ 1
CLIC4Q9Y696 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.32■■□□□ 1
CLIC4Q9Y696 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC21.32■■□□□ 1
CLIC4Q9Y696 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.32■■□□□ 1
CLIC4Q9Y696 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CLIC4Q9Y696 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLIC4Q9Y696 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.32■■□□□ 1
CLIC4Q9Y696 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLIC4Q9Y696 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CLIC4Q9Y696 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.32■■□□□ 1
CLIC4Q9Y696 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.32■■□□□ 1
CLIC4Q9Y696 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.31■■□□□ 1
CLIC4Q9Y696 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 GPAT2P1-201ENST00000444924 1672 ntBASIC21.31■■□□□ 1
CLIC4Q9Y696 AL109659.2-201ENST00000606809 1674 ntBASIC21.31■■□□□ 1
CLIC4Q9Y696 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 AC112777.1-201ENST00000540175 1423 ntBASIC21.31■■□□□ 1
CLIC4Q9Y696 AC005332.8-201ENST00000622750 2735 ntBASIC21.31■■□□□ 1
CLIC4Q9Y696 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
CLIC4Q9Y696 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.31■■□□□ 1
CLIC4Q9Y696 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLIC4Q9Y696 AL023284.2-201ENST00000405850 579 ntBASIC21.31■■□□□ 1
CLIC4Q9Y696 AC012618.2-201ENST00000428058 849 ntBASIC21.31■■□□□ 1
CLIC4Q9Y696 AC097488.1-201ENST00000507834 756 ntBASIC21.31■■□□□ 1
CLIC4Q9Y696 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.31■■□□□ 1
CLIC4Q9Y696 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.31■■□□□ 1
CLIC4Q9Y696 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLIC4Q9Y696 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CLIC4Q9Y696 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.31■■□□□ 1
CLIC4Q9Y696 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.31■■□□□ 1
CLIC4Q9Y696 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CLIC4Q9Y696 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLIC4Q9Y696 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.31■■□□□ 1
CLIC4Q9Y696 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.3■■□□□ 1
CLIC4Q9Y696 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.3■■□□□ 1
CLIC4Q9Y696 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CLIC4Q9Y696 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
CLIC4Q9Y696 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLIC4Q9Y696 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CLIC4Q9Y696 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CLIC4Q9Y696 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.3■■□□□ 1
CLIC4Q9Y696 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.3■■□□□ 1
CLIC4Q9Y696 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC21.3■■□□□ 1
CLIC4Q9Y696 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.3■■□□□ 1
CLIC4Q9Y696 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms