Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 KRT18P23-201ENST00000435622 1283 ntBASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 LINC01238-205ENST00000567549 1107 ntBASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 AC034236.2-201ENST00000606662 1610 ntBASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SNX9Q9Y5X1 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 FAM8A6P-201ENST00000407496 1135 ntBASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 HOMER2P1-201ENST00000455653 964 ntBASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 AL359075.1-203ENST00000462729 1002 ntBASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 Z98044.1-201ENST00000632503 1764 ntBASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
SNX9Q9Y5X1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SNX9Q9Y5X1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 ARMC10P1-201ENST00000313754 855 ntBASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SNX9Q9Y5X1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms