Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 AC012313.10-201ENST00000623509 926 ntBASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 MIR3652-201ENST00000579335 131 ntBASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 AC093503.3-201ENST00000624917 2352 ntBASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHGA9Q9Y5G4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 AC104417.2-201ENST00000562989 1793 ntBASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 AC092329.2-201ENST00000598402 547 ntBASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 AL121672.3-201ENST00000608644 468 ntBASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 AC092119.3-201ENST00000612618 583 ntBASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 Z82202.1-201ENST00000623446 1880 ntBASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHGA9Q9Y5G4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 TSSC2-201ENST00000450217 709 ntBASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms