Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AL023875.1-201ENST00000640777 796 ntBASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
R3HCC1Q9Y3T6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
R3HCC1Q9Y3T6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
R3HCC1Q9Y3T6 AC018553.1-201ENST00000616682 1458 ntBASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 AC116351.2-201ENST00000606540 1585 ntBASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
R3HCC1Q9Y3T6 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 KRASP1-201ENST00000407852 552 ntBASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 RPPH1-201ENST00000516869 333 ntBASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
R3HCC1Q9Y3T6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms