Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 AC010653.2-201ENST00000623505 997 ntBASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RPH3AQ9Y2J0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 TERF1P1-201ENST00000311003 1181 ntBASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RPH3AQ9Y2J0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 AC098818.2-201ENST00000564925 2320 ntBASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RPH3AQ9Y2J0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 MIR4674-201ENST00000582457 87 ntBASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 KRT8P3-201ENST00000519669 1449 ntBASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RPH3AQ9Y2J0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms