Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 MIR3687-1-201ENST00000614492 61 ntBASIC17.64■□□□□ 0.41
LHX6Q9UPM6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LHX6Q9UPM6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 SART3-203ENST00000546611 1184 ntBASIC17.63■□□□□ 0.41
LHX6Q9UPM6 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LHX6Q9UPM6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 GPX1P2-201ENST00000429271 606 ntBASIC17.62■□□□□ 0.41
LHX6Q9UPM6 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 Z69720.1-201ENST00000601483 472 ntBASIC17.62■□□□□ 0.41
LHX6Q9UPM6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 AC148477.8-201ENST00000624298 468 ntBASIC17.62■□□□□ 0.41
LHX6Q9UPM6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX6Q9UPM6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 AC112497.1-201ENST00000624824 639 ntBASIC17.61■□□□□ 0.41
LHX6Q9UPM6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LHX6Q9UPM6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.6■□□□□ 0.41
LHX6Q9UPM6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms